Installing qgis in ubuntu 18.04 error with sqlite tables, can no longer use apt

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I'm getting the following error:

$ sudo apt-get install grass grass-dev qgis python-qgis qgis-plugin-grass

Reading package lists... Done

Building dependency tree       

Reading state information... Done

grass-dev is already the newest version (7.4.0-1).

python-qgis is already the newest version (1:3.4.2+28bionic).

The following additional packages will be installed:

  qgis-providers

Suggested packages:

  gpsbabel

The following NEW packages will be installed:

  grass qgis qgis-plugin-grass qgis-providers

0 upgraded, 4 newly installed, 0 to remove and 2 not upgraded.

Need to get 0 B/12.7 MB of archives.

After this operation, 22.8 MB of additional disk space will be used.

Do you want to continue? [Y/n] y

Selecting previously unselected package qgis-providers.

(Reading database ... 398057 files and directories currently installed.)

Preparing to unpack .../qgis-providers_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-providers (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis.

Preparing to unpack .../qgis_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis-plugin-grass.

Preparing to unpack .../qgis-plugin-grass_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-plugin-grass (1:3.4.2+28bionic) ...

Selecting previously unselected package grass.

Preparing to unpack .../archives/grass_7.4.0-1_all.deb ...

Unpacking grass (7.4.0-1) ...

Setting up grass (7.4.0-1) ...

Setting up qgis-providers (1:3.4.2+28bionic) ...

/usr/lib/qgis/crssync: symbol lookup error: /usr/lib/libgdal.so.20: undefined symbol: sqlite3_column_table_name

dpkg: error processing package qgis-providers (--configure):

 installed qgis-providers package post-installation script subprocess returned error exit status 127

dpkg: dependency problems prevent configuration of qgis:

 qgis depends on qgis-providers (= 1:3.4.2+28bionic); however:

  Package qgis-providers is not configured yet.



dpkg: error processing package qgis (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for mime-support (3.60ubuntu1) ...

Processing triggers for desktop-file-utils (0.23-1ubuntu3.18.04.2) ...

dpkg: dependency problems prevent configuration of qgis-plugin-grass:

 qgis-plugin-grass depends on qgis (= 1:3.4.2+28bionic); however:

  Package qgis is not configured yet.



dpkg: error processing package qgis-plugin-grass (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for man-db (2.8.3-2ubuntu0.1) ...

Processing triggers for shared-mime-info (1.9-2) ...

Processing triggers for gnome-menus (3.13.3-11ubuntu1.1) ...

Processing triggers for hicolor-icon-theme (0.17-2) ...

Errors were encountered while processing:

 qgis-providers

 qgis

 qgis-plugin-grass

E: Sub-process /usr/bin/dpkg returned an error code (1)

Why is it failing on something to do with sqlite tables?

I followed this:
Dependency issues when trying to install qgis python-qgis qgis-plugin-grass

And trying to install:

sudo apt install libmysqlclient-dev

Produces the same error about qgis for some reason.

This seems to have permanently messed up my system. Anything I try to install produces this error.

Edit for debug

$ dpkg -S /usr/lib/libgdal.so.20

libgdal20: /usr/lib/libgdal.so.20

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

Please add output of dpkg -S /usr/lib/libgdal.so.20 and ldd /usr/lib/libgdal.so.20 to the question. Also note that your install command end with success on clean Ubuntu 18.04.1 LTS VM without PPAs. It opens qgis and reports that it has 2.18 version. Do you have any PPAs added to the system?
– N0rbert
Nov 29 at 18:37

Thanks, @N0rbert. ldd seems to have a lot of output but ldd /usr/lib/libgdal.so.20 grep | gdal returns nothing
– Mittenchops
Nov 29 at 19:20

Please share full output of ldd /usr/lib/libgdal.so.20 and apt-cache policy libgdal20.
– N0rbert
Nov 29 at 19:22

add a comment |

up vote
0
down vote

favorite

I'm getting the following error:

$ sudo apt-get install grass grass-dev qgis python-qgis qgis-plugin-grass

Reading package lists... Done

Building dependency tree       

Reading state information... Done

grass-dev is already the newest version (7.4.0-1).

python-qgis is already the newest version (1:3.4.2+28bionic).

The following additional packages will be installed:

  qgis-providers

Suggested packages:

  gpsbabel

The following NEW packages will be installed:

  grass qgis qgis-plugin-grass qgis-providers

0 upgraded, 4 newly installed, 0 to remove and 2 not upgraded.

Need to get 0 B/12.7 MB of archives.

After this operation, 22.8 MB of additional disk space will be used.

Do you want to continue? [Y/n] y

Selecting previously unselected package qgis-providers.

(Reading database ... 398057 files and directories currently installed.)

Preparing to unpack .../qgis-providers_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-providers (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis.

Preparing to unpack .../qgis_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis-plugin-grass.

Preparing to unpack .../qgis-plugin-grass_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-plugin-grass (1:3.4.2+28bionic) ...

Selecting previously unselected package grass.

Preparing to unpack .../archives/grass_7.4.0-1_all.deb ...

Unpacking grass (7.4.0-1) ...

Setting up grass (7.4.0-1) ...

Setting up qgis-providers (1:3.4.2+28bionic) ...

/usr/lib/qgis/crssync: symbol lookup error: /usr/lib/libgdal.so.20: undefined symbol: sqlite3_column_table_name

dpkg: error processing package qgis-providers (--configure):

 installed qgis-providers package post-installation script subprocess returned error exit status 127

dpkg: dependency problems prevent configuration of qgis:

 qgis depends on qgis-providers (= 1:3.4.2+28bionic); however:

  Package qgis-providers is not configured yet.



dpkg: error processing package qgis (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for mime-support (3.60ubuntu1) ...

Processing triggers for desktop-file-utils (0.23-1ubuntu3.18.04.2) ...

dpkg: dependency problems prevent configuration of qgis-plugin-grass:

 qgis-plugin-grass depends on qgis (= 1:3.4.2+28bionic); however:

  Package qgis is not configured yet.



dpkg: error processing package qgis-plugin-grass (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for man-db (2.8.3-2ubuntu0.1) ...

Processing triggers for shared-mime-info (1.9-2) ...

Processing triggers for gnome-menus (3.13.3-11ubuntu1.1) ...

Processing triggers for hicolor-icon-theme (0.17-2) ...

Errors were encountered while processing:

 qgis-providers

 qgis

 qgis-plugin-grass

E: Sub-process /usr/bin/dpkg returned an error code (1)

Why is it failing on something to do with sqlite tables?

I followed this:
Dependency issues when trying to install qgis python-qgis qgis-plugin-grass

And trying to install:

sudo apt install libmysqlclient-dev

Produces the same error about qgis for some reason.

This seems to have permanently messed up my system. Anything I try to install produces this error.

Edit for debug

$ dpkg -S /usr/lib/libgdal.so.20

libgdal20: /usr/lib/libgdal.so.20

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

Please add output of dpkg -S /usr/lib/libgdal.so.20 and ldd /usr/lib/libgdal.so.20 to the question. Also note that your install command end with success on clean Ubuntu 18.04.1 LTS VM without PPAs. It opens qgis and reports that it has 2.18 version. Do you have any PPAs added to the system?
– N0rbert
Nov 29 at 18:37

Thanks, @N0rbert. ldd seems to have a lot of output but ldd /usr/lib/libgdal.so.20 grep | gdal returns nothing
– Mittenchops
Nov 29 at 19:20

Please share full output of ldd /usr/lib/libgdal.so.20 and apt-cache policy libgdal20.
– N0rbert
Nov 29 at 19:22

add a comment |

up vote
0
down vote

favorite

I'm getting the following error:

$ sudo apt-get install grass grass-dev qgis python-qgis qgis-plugin-grass

Reading package lists... Done

Building dependency tree       

Reading state information... Done

grass-dev is already the newest version (7.4.0-1).

python-qgis is already the newest version (1:3.4.2+28bionic).

The following additional packages will be installed:

  qgis-providers

Suggested packages:

  gpsbabel

The following NEW packages will be installed:

  grass qgis qgis-plugin-grass qgis-providers

0 upgraded, 4 newly installed, 0 to remove and 2 not upgraded.

Need to get 0 B/12.7 MB of archives.

After this operation, 22.8 MB of additional disk space will be used.

Do you want to continue? [Y/n] y

Selecting previously unselected package qgis-providers.

(Reading database ... 398057 files and directories currently installed.)

Preparing to unpack .../qgis-providers_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-providers (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis.

Preparing to unpack .../qgis_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis-plugin-grass.

Preparing to unpack .../qgis-plugin-grass_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-plugin-grass (1:3.4.2+28bionic) ...

Selecting previously unselected package grass.

Preparing to unpack .../archives/grass_7.4.0-1_all.deb ...

Unpacking grass (7.4.0-1) ...

Setting up grass (7.4.0-1) ...

Setting up qgis-providers (1:3.4.2+28bionic) ...

/usr/lib/qgis/crssync: symbol lookup error: /usr/lib/libgdal.so.20: undefined symbol: sqlite3_column_table_name

dpkg: error processing package qgis-providers (--configure):

 installed qgis-providers package post-installation script subprocess returned error exit status 127

dpkg: dependency problems prevent configuration of qgis:

 qgis depends on qgis-providers (= 1:3.4.2+28bionic); however:

  Package qgis-providers is not configured yet.



dpkg: error processing package qgis (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for mime-support (3.60ubuntu1) ...

Processing triggers for desktop-file-utils (0.23-1ubuntu3.18.04.2) ...

dpkg: dependency problems prevent configuration of qgis-plugin-grass:

 qgis-plugin-grass depends on qgis (= 1:3.4.2+28bionic); however:

  Package qgis is not configured yet.



dpkg: error processing package qgis-plugin-grass (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for man-db (2.8.3-2ubuntu0.1) ...

Processing triggers for shared-mime-info (1.9-2) ...

Processing triggers for gnome-menus (3.13.3-11ubuntu1.1) ...

Processing triggers for hicolor-icon-theme (0.17-2) ...

Errors were encountered while processing:

 qgis-providers

 qgis

 qgis-plugin-grass

E: Sub-process /usr/bin/dpkg returned an error code (1)

Why is it failing on something to do with sqlite tables?

I followed this:
Dependency issues when trying to install qgis python-qgis qgis-plugin-grass

And trying to install:

sudo apt install libmysqlclient-dev

Produces the same error about qgis for some reason.

This seems to have permanently messed up my system. Anything I try to install produces this error.

Edit for debug

$ dpkg -S /usr/lib/libgdal.so.20

libgdal20: /usr/lib/libgdal.so.20

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

I'm getting the following error:

$ sudo apt-get install grass grass-dev qgis python-qgis qgis-plugin-grass

Reading package lists... Done

Building dependency tree       

Reading state information... Done

grass-dev is already the newest version (7.4.0-1).

python-qgis is already the newest version (1:3.4.2+28bionic).

The following additional packages will be installed:

  qgis-providers

Suggested packages:

  gpsbabel

The following NEW packages will be installed:

  grass qgis qgis-plugin-grass qgis-providers

0 upgraded, 4 newly installed, 0 to remove and 2 not upgraded.

Need to get 0 B/12.7 MB of archives.

After this operation, 22.8 MB of additional disk space will be used.

Do you want to continue? [Y/n] y

Selecting previously unselected package qgis-providers.

(Reading database ... 398057 files and directories currently installed.)

Preparing to unpack .../qgis-providers_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-providers (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis.

Preparing to unpack .../qgis_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis (1:3.4.2+28bionic) ...

Selecting previously unselected package qgis-plugin-grass.

Preparing to unpack .../qgis-plugin-grass_1%3a3.4.2+28bionic_amd64.deb ...

Unpacking qgis-plugin-grass (1:3.4.2+28bionic) ...

Selecting previously unselected package grass.

Preparing to unpack .../archives/grass_7.4.0-1_all.deb ...

Unpacking grass (7.4.0-1) ...

Setting up grass (7.4.0-1) ...

Setting up qgis-providers (1:3.4.2+28bionic) ...

/usr/lib/qgis/crssync: symbol lookup error: /usr/lib/libgdal.so.20: undefined symbol: sqlite3_column_table_name

dpkg: error processing package qgis-providers (--configure):

 installed qgis-providers package post-installation script subprocess returned error exit status 127

dpkg: dependency problems prevent configuration of qgis:

 qgis depends on qgis-providers (= 1:3.4.2+28bionic); however:

  Package qgis-providers is not configured yet.



dpkg: error processing package qgis (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for mime-support (3.60ubuntu1) ...

Processing triggers for desktop-file-utils (0.23-1ubuntu3.18.04.2) ...

dpkg: dependency problems prevent configuration of qgis-plugin-grass:

 qgis-plugin-grass depends on qgis (= 1:3.4.2+28bionic); however:

  Package qgis is not configured yet.



dpkg: error processing package qgis-plugin-grass (--configure):

 dependency problems - leaving unconfigured

No apport report written because the error message indicates its a followup error from a previous failure.

                                                                                                          Processing triggers for man-db (2.8.3-2ubuntu0.1) ...

Processing triggers for shared-mime-info (1.9-2) ...

Processing triggers for gnome-menus (3.13.3-11ubuntu1.1) ...

Processing triggers for hicolor-icon-theme (0.17-2) ...

Errors were encountered while processing:

 qgis-providers

 qgis

 qgis-plugin-grass

E: Sub-process /usr/bin/dpkg returned an error code (1)

Why is it failing on something to do with sqlite tables?

I followed this:
Dependency issues when trying to install qgis python-qgis qgis-plugin-grass

And trying to install:

sudo apt install libmysqlclient-dev

Produces the same error about qgis for some reason.

This seems to have permanently messed up my system. Anything I try to install produces this error.

Edit for debug

$ dpkg -S /usr/lib/libgdal.so.20

libgdal20: /usr/lib/libgdal.so.20

package-management dependencies sqlite3 qgis

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

edited Nov 29 at 19:20

asked Nov 29 at 16:55

Mittenchops

71441534

asked Nov 29 at 16:55

Mittenchops

71441534

asked Nov 29 at 16:55

Mittenchops

71441534

Please add output of dpkg -S /usr/lib/libgdal.so.20 and ldd /usr/lib/libgdal.so.20 to the question. Also note that your install command end with success on clean Ubuntu 18.04.1 LTS VM without PPAs. It opens qgis and reports that it has 2.18 version. Do you have any PPAs added to the system?
– N0rbert
Nov 29 at 18:37

Thanks, @N0rbert. ldd seems to have a lot of output but ldd /usr/lib/libgdal.so.20 grep | gdal returns nothing
– Mittenchops
Nov 29 at 19:20

Please share full output of ldd /usr/lib/libgdal.so.20 and apt-cache policy libgdal20.
– N0rbert
Nov 29 at 19:22

add a comment |

Please add output of dpkg -S /usr/lib/libgdal.so.20 and ldd /usr/lib/libgdal.so.20 to the question. Also note that your install command end with success on clean Ubuntu 18.04.1 LTS VM without PPAs. It opens qgis and reports that it has 2.18 version. Do you have any PPAs added to the system?
– N0rbert
Nov 29 at 18:37

Thanks, @N0rbert. ldd seems to have a lot of output but ldd /usr/lib/libgdal.so.20 grep | gdal returns nothing
– Mittenchops
Nov 29 at 19:20

Please share full output of ldd /usr/lib/libgdal.so.20 and apt-cache policy libgdal20.
– N0rbert
Nov 29 at 19:22

Please add output of dpkg -S /usr/lib/libgdal.so.20 and ldd /usr/lib/libgdal.so.20 to the question. Also note that your install command end with success on clean Ubuntu 18.04.1 LTS VM without PPAs. It opens qgis and reports that it has 2.18 version. Do you have any PPAs added to the system?
– N0rbert
Nov 29 at 18:37

Thanks, @N0rbert. ldd seems to have a lot of output but ldd /usr/lib/libgdal.so.20 grep | gdal returns nothing
– Mittenchops
Nov 29 at 19:20

Please share full output of ldd /usr/lib/libgdal.so.20 and apt-cache policy libgdal20.
– N0rbert
Nov 29 at 19:22

add a comment |

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