Merging non-zero differing bytes in large files
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I am trying to a salvage an old scratched DVD by ripping it to ISO. I have two readers and created an ISO from each. Each reader is unable to read certain different bytes of the DVD and replaces them with 0s. When I compare the files using cmp -l file1.iso file2.iso
, I see that certain bytes on the left are 0 while certain other bytes on the right are 0 (the corresponding bytes on the other files are non-zero). I want to create a 3rd file, say file3.iso
that merges the non-zero differing bytes from the above two files. As an example, assume for simplicity that each file has 6 bytes as follows
file1.iso file2.iso
--------- ---------
0 0
1 1
2 0
3 0
0 4
0 5
file3.iso
should be as follows:
0
1
2
3
4
5
The files are quite large (around 8GB). Each file has the same number of bytes. I am using Ubuntu 16.04
Can anyone suggest the easiest way to do what I want. I can use the output of cmp -l
as intermediate data but want to avoid writing code.
files iso binary merge comparison
|
show 2 more comments
up vote
2
down vote
favorite
I am trying to a salvage an old scratched DVD by ripping it to ISO. I have two readers and created an ISO from each. Each reader is unable to read certain different bytes of the DVD and replaces them with 0s. When I compare the files using cmp -l file1.iso file2.iso
, I see that certain bytes on the left are 0 while certain other bytes on the right are 0 (the corresponding bytes on the other files are non-zero). I want to create a 3rd file, say file3.iso
that merges the non-zero differing bytes from the above two files. As an example, assume for simplicity that each file has 6 bytes as follows
file1.iso file2.iso
--------- ---------
0 0
1 1
2 0
3 0
0 4
0 5
file3.iso
should be as follows:
0
1
2
3
4
5
The files are quite large (around 8GB). Each file has the same number of bytes. I am using Ubuntu 16.04
Can anyone suggest the easiest way to do what I want. I can use the output of cmp -l
as intermediate data but want to avoid writing code.
files iso binary merge comparison
Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
1
Which tool did you use to read from the DVD disk (and write to iso files)?ddrescue
in the program packagegddrescue
is a good alternative. See the info pageinfo ddrescue
. There is alsodvdisaster
. These programs may give you better data than you have now.
– sudodus
Nov 28 at 20:51
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
Good luck withddrescue
:-) and please let us know about your progress.
– sudodus
Nov 29 at 5:12
|
show 2 more comments
up vote
2
down vote
favorite
up vote
2
down vote
favorite
I am trying to a salvage an old scratched DVD by ripping it to ISO. I have two readers and created an ISO from each. Each reader is unable to read certain different bytes of the DVD and replaces them with 0s. When I compare the files using cmp -l file1.iso file2.iso
, I see that certain bytes on the left are 0 while certain other bytes on the right are 0 (the corresponding bytes on the other files are non-zero). I want to create a 3rd file, say file3.iso
that merges the non-zero differing bytes from the above two files. As an example, assume for simplicity that each file has 6 bytes as follows
file1.iso file2.iso
--------- ---------
0 0
1 1
2 0
3 0
0 4
0 5
file3.iso
should be as follows:
0
1
2
3
4
5
The files are quite large (around 8GB). Each file has the same number of bytes. I am using Ubuntu 16.04
Can anyone suggest the easiest way to do what I want. I can use the output of cmp -l
as intermediate data but want to avoid writing code.
files iso binary merge comparison
I am trying to a salvage an old scratched DVD by ripping it to ISO. I have two readers and created an ISO from each. Each reader is unable to read certain different bytes of the DVD and replaces them with 0s. When I compare the files using cmp -l file1.iso file2.iso
, I see that certain bytes on the left are 0 while certain other bytes on the right are 0 (the corresponding bytes on the other files are non-zero). I want to create a 3rd file, say file3.iso
that merges the non-zero differing bytes from the above two files. As an example, assume for simplicity that each file has 6 bytes as follows
file1.iso file2.iso
--------- ---------
0 0
1 1
2 0
3 0
0 4
0 5
file3.iso
should be as follows:
0
1
2
3
4
5
The files are quite large (around 8GB). Each file has the same number of bytes. I am using Ubuntu 16.04
Can anyone suggest the easiest way to do what I want. I can use the output of cmp -l
as intermediate data but want to avoid writing code.
files iso binary merge comparison
files iso binary merge comparison
edited Nov 28 at 20:33
asked Nov 28 at 20:25
Jus12
12617
12617
Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
1
Which tool did you use to read from the DVD disk (and write to iso files)?ddrescue
in the program packagegddrescue
is a good alternative. See the info pageinfo ddrescue
. There is alsodvdisaster
. These programs may give you better data than you have now.
– sudodus
Nov 28 at 20:51
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
Good luck withddrescue
:-) and please let us know about your progress.
– sudodus
Nov 29 at 5:12
|
show 2 more comments
Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
1
Which tool did you use to read from the DVD disk (and write to iso files)?ddrescue
in the program packagegddrescue
is a good alternative. See the info pageinfo ddrescue
. There is alsodvdisaster
. These programs may give you better data than you have now.
– sudodus
Nov 28 at 20:51
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
Good luck withddrescue
:-) and please let us know about your progress.
– sudodus
Nov 29 at 5:12
Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
1
1
Which tool did you use to read from the DVD disk (and write to iso files)?
ddrescue
in the program package gddrescue
is a good alternative. See the info page info ddrescue
. There is also dvdisaster
. These programs may give you better data than you have now.– sudodus
Nov 28 at 20:51
Which tool did you use to read from the DVD disk (and write to iso files)?
ddrescue
in the program package gddrescue
is a good alternative. See the info page info ddrescue
. There is also dvdisaster
. These programs may give you better data than you have now.– sudodus
Nov 28 at 20:51
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
Good luck with
ddrescue
:-) and please let us know about your progress.– sudodus
Nov 29 at 5:12
Good luck with
ddrescue
:-) and please let us know about your progress.– sudodus
Nov 29 at 5:12
|
show 2 more comments
1 Answer
1
active
oldest
votes
up vote
2
down vote
I wrote a Python script for you.
#!/usr/bin/env python3
'''
Given two input files and one output file, merge the input files on
matching bytes or bytes that are null in one file but not the other.
Non-matching non-null bytes will raise a ValueError.
'''
import sys
args = sys.argv[1:]
file1 = open(args[0], 'rb')
file2 = open(args[1], 'rb')
file_out = open(args[2], 'wb')
def get_bytes(file):
'''Return a generator that yields each byte in the given file.'''
def get_byte():
return file.read(1)
return iter(get_byte, b'')
for i, (byte1, byte2) in enumerate(zip(get_bytes(file1), get_bytes(file2))):
if byte1 == byte2:
byte_out = byte1
elif ord(byte1) == 0:
byte_out = byte2
elif ord(byte2) == 0:
byte_out = byte1
else:
msg = 'Bytes at {:#x} are both non-zero and do not match: {}, {}'
raise ValueError(msg.format(i, byte1, byte2))
file_out.write(byte_out)
Make it executable then call it like so:
$ ./test.py file1.iso file2.iso file3.iso
Or for short:
$ ./test.py file{1,2,3}.iso
P.s. I've recently been studying reading files in different ways, so this is nice serendipity.
add a comment |
1 Answer
1
active
oldest
votes
1 Answer
1
active
oldest
votes
active
oldest
votes
active
oldest
votes
up vote
2
down vote
I wrote a Python script for you.
#!/usr/bin/env python3
'''
Given two input files and one output file, merge the input files on
matching bytes or bytes that are null in one file but not the other.
Non-matching non-null bytes will raise a ValueError.
'''
import sys
args = sys.argv[1:]
file1 = open(args[0], 'rb')
file2 = open(args[1], 'rb')
file_out = open(args[2], 'wb')
def get_bytes(file):
'''Return a generator that yields each byte in the given file.'''
def get_byte():
return file.read(1)
return iter(get_byte, b'')
for i, (byte1, byte2) in enumerate(zip(get_bytes(file1), get_bytes(file2))):
if byte1 == byte2:
byte_out = byte1
elif ord(byte1) == 0:
byte_out = byte2
elif ord(byte2) == 0:
byte_out = byte1
else:
msg = 'Bytes at {:#x} are both non-zero and do not match: {}, {}'
raise ValueError(msg.format(i, byte1, byte2))
file_out.write(byte_out)
Make it executable then call it like so:
$ ./test.py file1.iso file2.iso file3.iso
Or for short:
$ ./test.py file{1,2,3}.iso
P.s. I've recently been studying reading files in different ways, so this is nice serendipity.
add a comment |
up vote
2
down vote
I wrote a Python script for you.
#!/usr/bin/env python3
'''
Given two input files and one output file, merge the input files on
matching bytes or bytes that are null in one file but not the other.
Non-matching non-null bytes will raise a ValueError.
'''
import sys
args = sys.argv[1:]
file1 = open(args[0], 'rb')
file2 = open(args[1], 'rb')
file_out = open(args[2], 'wb')
def get_bytes(file):
'''Return a generator that yields each byte in the given file.'''
def get_byte():
return file.read(1)
return iter(get_byte, b'')
for i, (byte1, byte2) in enumerate(zip(get_bytes(file1), get_bytes(file2))):
if byte1 == byte2:
byte_out = byte1
elif ord(byte1) == 0:
byte_out = byte2
elif ord(byte2) == 0:
byte_out = byte1
else:
msg = 'Bytes at {:#x} are both non-zero and do not match: {}, {}'
raise ValueError(msg.format(i, byte1, byte2))
file_out.write(byte_out)
Make it executable then call it like so:
$ ./test.py file1.iso file2.iso file3.iso
Or for short:
$ ./test.py file{1,2,3}.iso
P.s. I've recently been studying reading files in different ways, so this is nice serendipity.
add a comment |
up vote
2
down vote
up vote
2
down vote
I wrote a Python script for you.
#!/usr/bin/env python3
'''
Given two input files and one output file, merge the input files on
matching bytes or bytes that are null in one file but not the other.
Non-matching non-null bytes will raise a ValueError.
'''
import sys
args = sys.argv[1:]
file1 = open(args[0], 'rb')
file2 = open(args[1], 'rb')
file_out = open(args[2], 'wb')
def get_bytes(file):
'''Return a generator that yields each byte in the given file.'''
def get_byte():
return file.read(1)
return iter(get_byte, b'')
for i, (byte1, byte2) in enumerate(zip(get_bytes(file1), get_bytes(file2))):
if byte1 == byte2:
byte_out = byte1
elif ord(byte1) == 0:
byte_out = byte2
elif ord(byte2) == 0:
byte_out = byte1
else:
msg = 'Bytes at {:#x} are both non-zero and do not match: {}, {}'
raise ValueError(msg.format(i, byte1, byte2))
file_out.write(byte_out)
Make it executable then call it like so:
$ ./test.py file1.iso file2.iso file3.iso
Or for short:
$ ./test.py file{1,2,3}.iso
P.s. I've recently been studying reading files in different ways, so this is nice serendipity.
I wrote a Python script for you.
#!/usr/bin/env python3
'''
Given two input files and one output file, merge the input files on
matching bytes or bytes that are null in one file but not the other.
Non-matching non-null bytes will raise a ValueError.
'''
import sys
args = sys.argv[1:]
file1 = open(args[0], 'rb')
file2 = open(args[1], 'rb')
file_out = open(args[2], 'wb')
def get_bytes(file):
'''Return a generator that yields each byte in the given file.'''
def get_byte():
return file.read(1)
return iter(get_byte, b'')
for i, (byte1, byte2) in enumerate(zip(get_bytes(file1), get_bytes(file2))):
if byte1 == byte2:
byte_out = byte1
elif ord(byte1) == 0:
byte_out = byte2
elif ord(byte2) == 0:
byte_out = byte1
else:
msg = 'Bytes at {:#x} are both non-zero and do not match: {}, {}'
raise ValueError(msg.format(i, byte1, byte2))
file_out.write(byte_out)
Make it executable then call it like so:
$ ./test.py file1.iso file2.iso file3.iso
Or for short:
$ ./test.py file{1,2,3}.iso
P.s. I've recently been studying reading files in different ways, so this is nice serendipity.
edited Nov 29 at 5:29
answered Nov 28 at 21:42
wjandrea
8,06142258
8,06142258
add a comment |
add a comment |
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Are there any non-zero bytes that differ? say in file1.iso you have a 0x1 while in file2.iso you have a 0x2
– wjandrea
Nov 28 at 20:37
1
Which tool did you use to read from the DVD disk (and write to iso files)?
ddrescue
in the program packagegddrescue
is a good alternative. See the info pageinfo ddrescue
. There is alsodvdisaster
. These programs may give you better data than you have now.– sudodus
Nov 28 at 20:51
@wjandrea No. Only zero bytes differ.
– Jus12
Nov 28 at 21:56
@sudodus I used "disks" program to rip the DVD. I will look at ddrescue. Thanks for the reference.
– Jus12
Nov 28 at 21:57
Good luck with
ddrescue
:-) and please let us know about your progress.– sudodus
Nov 29 at 5:12